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SRX889162: GSM1617869: 4hr_R1; Mus musculus; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2000) run: 46.2M spots, 2.4G bases, 1.6Gb downloads

Submitted by: Gene Expression Omnibus (GEO)
Study: Circadian rhythm in NIH3T3 cells
show Abstracthide Abstract
Identification of cyclical expressed coding and non-coding genes during the circadian rhythm in NIH3T3 cells. NIH3T3 cells were synchronized for their circadian rhythm and RNA sequencing were performed at several time points along the rhythm. This data was used to identify cyclical expressed genes as well as long intergenic non-coding RNAs. Overall design: NIH3T3 cells were synchronized with 100 nM Dexamethasone for 2 hours, then medium was changed to normal culture medium (0h). Every 4 hours cells were harvested, RNA isolated and RNAseq performed.
Sample: 4hr_R1
SAMN03371499 • SRS856064 • All experiments • All runs
Organism: Mus musculus
Library:
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: RNA from harvested cells were column purified with Purelink RNA Mini kit (12183025, life technologies). Standard illumina library for single end reads was used for library preparation.
Experiment attributes:
GEO Accession: GSM1617869
Links:
External link:
Runs: 1 run, 46.2M spots, 2.4G bases, 1.6Gb
Run# of Spots# of BasesSizePublished
SRR181679546,186,9832.4G1.6Gb2016-01-04

ID:
1276049

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